I’m here to bring you my progress in EternaRNA’s COVID 19 vaccine RNA backbone sttability puzzle thus far.
LEIA 1
RNA sequence
GGAAAGGGCCCGGCGGGCCCAACGGCCGCCGCGGCCGCAACGGCAACAACAACAACACAGCAAACAAACGCGCGCUUCGGCGCGCGAAAAGAAACAACAACAACAAC
LEIA 2
RNA sequence
GGAAAUAAUUAAUAAAUAUAAAUAGAGAACAGAGAUAUAUAGAGAAUAAAUAUAAUUAAAUAAUAAAAUCGCGCGUUCGCGCGCGAAAAAGAAACAACAACAACAAC
LEIA 3
RNA sequence
GGAAAUUAUGCUUACUAAUGAUAACACUAAUUAAAAGGCCGGCCGGCCUGUUUUCUCUCGGGCCGGGAUGCGCGCUUCGGCGCGCAAAAAGAAACAACAACAACAAC
LEIA 4
RNA sequence
GGAAAAAUACCUUGAAGUGUUAUCAUUAAGGAAAGGGAAAGGAGGAGGAGGAGGAGGAGGAGGAAAAAGCGCGCGUUCGCGCGCGCAAAAGAAACAACAACAACAAC
LEIA 5
RNA sequence
GGAAAUAAAACUAAGUCUAGAGCUAUGUAGGAGGAUUACAGAGGGAGGGAGGGAGGGAGGGAGAAAAAUCUCGCGUUCGCGCGAGAAAAAGAAACAACAACAACAAC
LEIA 6
RNA sequence
GGAAACAGAUUACAGAUUACAGAUUACAGAUUACAGAUUACAGAUUACAGAAUUACAGAUUACAAAAAGCAGCGCUUCGGCGCUGCAAAAGAAACAACAACAACAAC
LEIA 7
RNA sequence
GGAAACUGGAUACCACUUCAGAGAGCUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUACGCGCGCUUCGGUGCGCGAAAAGAAACAACAACAACAAC
LEIA 8
RNA sequence
GGAAAAGCUGCACUUACUAACAAUGUUUAUAUAUAUAUAUAUAUAUAUACACACACACACACACACACUACAUGCUUCGGCAUGUAAAAAGAAACAACAACAACAAC
LEIA 9
RNA sequence
GGAAAAGCUGCACUUACUAACAAUGUUUUCUAUGACUUUGCUGUGUCUAAGGGUUACACAUAUAUAUAGCGCGACUUCGGUCGCGCAAAAGAAACAACAACAACAAC
LEIA 10
RNA sequence
GGAAAUGACUUUGCUGUGUCUAAGGGUUGGUGUGUGUGUAAAGAAAGAAAGAAAGAAAGAAAGAAAGAUGCUCGCUUCGGCGAGCAAAAAGAAACAACAACAACAAC
LEIA 11
RNA sequence
GGAAAUAAGGAAGGAAGUUCUGUUGAAUUUCAUCAAAAAUUAUUGAAAUCAAUAGCAAGAAGAGAGAGAGCGCGCUUCGGCGCGCUAAAAGAAACAACAACAACAAC
LEIA 12
RNA sequence
GGAAAACUAGUGGUCCAAAACUUGUAGGUUCCAAUUACUACAGUAGCUCCUCUAGUAAUAAUAAUAUACUCGCCGUUCGCGGCGAGAAAAGAAACAACAACAACAAC
LEIA 13
RNA sequence
GGAAAUAGCUGCACUUACUAACAAUGUUUUCUAUGACUUUGCUGUGUCUAAGGGUUAAUAAUAAUAAAGCUCGCGUUCGCGCGAGCAAAAGAAACAACAACAACAAC
LEIA 14
RNA sequence
GGAAAUAGAGACACUCAUAAAGUCUGUGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGCGUGCGUUCGCGCACGCAAAAGAAACAACAACAACAAC
LEIA 15
RNA sequence
GGAAACCUGGUUUAACAUAUAGUGAACCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAUGCCUUCGGGCGUCGAAAAGAAACAACAACAACAAC
LEIA 16
RNA sequence
GGAAAGAUGGAUCUGGGUAAGGAAGGUAUUCCUUACCCAGAUCCAAGAAGAAGAAGAAGAAGAAGAAGCGCAUAGUUCGCUAUGCGAAAAGAAACAACAACAACAAC
LEIA 17
RNA sequence
GGAAAAUGCACAAUCGUUUUUAAAGGUCAAAAUUUUAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGUACGUAGUUCGCUACGUAAAAAGAAACAACAACAACAAC
LEIA 18
RNA sequence
GGAAAUGAAGUCAUAUUUUGACAAAUCCUUCAUUGUUAAUGCCUAUAUUAACCAAGAAGAAAGAAGAACGCUGCGUUCGCGUGGCGAAAAGAAACAACAACAACAAC
LEIA 19
RNA sequence
GGAAAAAGUUUAGAAUAGACGGUGACAUUCAACUGGAUACCACUUCAGAGAGCUAAUAAUAAUAAUAAGAGCGUGUUCGUACGCUCAAAAGAAACAACAACAACAAC
LEIA 20
RNA sequence
GGAAAGUCGCGCGCGCGCGCGCGCGGCGGCGCGCGCGCGCGCGCGAGCGCGCGCGCGGGCGGGCGCAGCGCUCAGUUCGCUGAGCGAAAAGAAACAACAACAACAAC
LEIA 21
RNA sequence
GGAAAGGGCCCGCGCCCGCCCGCCGGCGGGCGGGCGGGCGCGGGCCGGCGCCGCGGCGGCGGCGCCGGCGCGGGCUUCGGCCCGCGAAAAGAAACAACAACAACAAC
LEIA 22
RNA sequence
GGAAACCGGGCCGGCCCGCCGGCGGGCGGGCGGGCGGGCCCGCCCGGGCCCGCCGGCGGGCCGGCCCGACGGGCCUUCGGGCCCGUAAAAGAAACAACAACAACAAC
LEIA 23
RNA sequence
GGAAACCCGCGCGGAAACAAACCACGUUAAUGCGCGGGCCCAAACAGGGCGGGCGGAGGACCGGCCCGACGCGGCUUCGGCCGCGUAAAAGAAACAACAACAACAAC
LEIA 24
RNA sequence
GGAAACGGGCCCGGGCCCGGGCCCGGGCCCGGGCCGGGCGGCCCGGGCCCGGGCCCGGGCCCGGGCCCGCCCGCGUUCGCGCGGGCAAAAGAAACAACAACAACAAC
LEIA 25
RNA sequence
GGAAACGGGCCCGGGCCCGGGCCCGGGCCCGGGCCGGGCGGCCCGGGCCCGGGCCCGGGCCCGGGCCCGGCCCGCUUCGGCGGGCCAAAAGAAACAACAACAACAAC
LEIA 26
RNA sequence
GGAAAUGGCCCGCCCGCGCCCGGCGCGGCCCGCCCGGGCGGGCGGGCCGCGCCGGGCGCGGGCGGGCCGGCGUGCUUCGGCACGCCAAAAGAAACAACAACAACAAC
LEIA 27
RNA sequence
GGAAACGGGCCCGGGCCCGGGCCCGGGCCCGGCCCUUUUGGGCCGGGCCCGGGCCCGGGCCCGGGCCCGGCCCACUUCGGUGGGCCAAAAGAAACAACAACAACAAC
LEIA 28
RNA sequence
GGAAACGGGCCCGGGCCCGGGCCCGGGCCCGGGCCUUUUGGCCCGGGCCCGGGCCCGGGCCCGGGCCCGCGGGCCUUCGGGCCCGCAAAAGAAACAACAACAACAAC
LEIA 29
RNA sequence
GGAAACGCGCCCGGGCCCGGGCCCGGGCCCGGCCCUUUUGGGCCGGGCCCGGGCCCGGGCCCGGGCGCCGGCGCCUUCGGGUGCCGAAAAGAAACAACAACAACAAC
LEIA 30
RNA sequence
GGAAACGCGCCCGGGCCCGGGCCCGGGCCCGGCCCUUUUGGGCCGGGCCCGGGCCCGGGCCCGGGCGCCGGCUCCUUCGGGAGCCGAAAAGAAACAACAACAACAAC
LEIA 31
RNA sequence
GGAAAGGGCCCGGGCCCGGGCCCGGGCCCGGGCCCUUUUGGGCCCGGGCCCGGGCCCGGGCCCGGGCCGACCGCCUUCGGGCGGUCAAAAGAAACAACAACAACAAC
LEIA 32
RNA sequence
GGAAAGGGCCCGGGCCCGGGCCCGGGCCCGGGCCCGAAAGGGCCCGGGCCCGGGCCCGGGCCCGGGCCGAGCCGCUUCGGCGGCUCAAAAGAAACAACAACAACAAC
Here’s some notes: In LEIA 31 if bases 70 and 85 are to be changed to G and C respectively the total energy will be -104.3 KCAL. The same goes for LEIA 32 which results in an energy of -104.5 KCAL though the latter is based on hoglagoo’s solution.
May the force be with you, always.